Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798318.1_cds_XP_016459587.1_5273
CDS Infomation

[gene=LOC107783102] [db_xref=GeneID:107783102] [protein=U-box domain-containing protein 35-like] [protein_id=XP_016459587.1] [location=complement(join(20807..20998,21134..21883,21975..22409,22498..22599,22823..23148,23610..23800,24356..24477,24547..24668,24945..25152))] [gbkey=CDS]
Sequence

ATGGAAGAAAAAGATGGAGTAGTAACTAAAGTGGAAGGCCTAAGTGCTTTGAATCCATTA
AACTCTTCCACCATTGCAGTAGCTATTAATGGTAAGAAAAAAAGCAAATATGTTGTGAGC
TGGGCATTAGACAAATTTGTGCCTGAAGGAAAGGTTTGCTTCAAGCTGTTACATGTCCGG
CCGTGCATAACTGGTGTGCCAACTCCCATGGGAAACTCTATACCTATTTCACAAGTGCGG
GATGATGTAGTGGCCGCTTTCCGGAAGGATGTAGAATGGCAAACAAGTGAAAAGCTGCAT
CCTTACAAGATGTTATGCACTAGACTAAAGGTCCAAGTAGAAGTTGTACAGCTTGAATCA
GATGATATCGTGGAAGCAATAGCACATGAGGTCTCCAAACTTAACATCATCAAGCTTGTC
ATAGGTGCTTCGTCTTGGAGCATATTTTCTAGGGGACAAAGCTTATCCTCAAGAATCTCA
GACAGTATTCCAAGCTTTTGTACCATCTATGCTGTTTCAAGAGGAAAGTTGTTATCCATA
CGTCCTTCTAATTCAGAGATAAATGGAAGCAGTTGGACTGAAGATAGCAACACTAGCTGC
TCAATCAGCACTTCAACAGGCCACTCTTCCAGTTTACTAACAGAAAAGTCAGACCTGGAC
TCAAGTTCTTCGTACAGTCAATTCCGTTCTCCTTCACTGCCAATGCAAAGATTTCAAGCT
CTTTCAAATATTAATCAGAACTTTCCTCATAGAAGAGCAATCTCAAATGAAATCATCCAC
CATAAGAACTATTCTCTTGATTTTGGAGACAGCGAGGACGATGTCAGTTCTTGTCCCCAA
AGATCATTTCTTAGGGAAAGGAATAATCTTGCTTCTAGTTTTCGGAGCTTAGTAACAGAC
TTTTATACAATGGCAGATGATCAAGCTTCCACCTCAGGGGCTCCAACAGATTTATCATTG
AGAAATGAGGTGGATATCAATTTTGAGCTAGAGAAGCTAAGAACTGAACTAAGACATACT
CAAGGAATGTACGCAGTTGCACAAACTGAAGTACTTGATGCTTCTAGGAAGATGAATGAA
CTTCAAAACCGCCGGTTGGAGGAAGAAATTAAACTCCAGGAAATTAGTTTAAAGGAGGAA
GAAGCAAAAGATTTGGTACGAAAAGAGAAAGAGGAGTACAAAGCTGCAAAAAGAGAAGCT
GATTATGTGAAGGACTGTGCTGAAAGAGAGGCTGCACTAAGAAAAGAAGCGGAACTATTA
GCATTACGTGAGGCAAAAGAAAAAGACAAGCTTGAAAATGCCTTGACAGATCAGGCACAT
CAGTACCAGGAATTTACTTGGGAAGAAATCGTATCTTCTACCTCTTCATTTGCTGAAAAT
CTTAAAATTGGTGTGGGCGCATATGGAACCGTTTATAAATGCAGCTTGCGTCATACTACA
GTTGCCGTCAAAGTTCTTCACTCCAAGTCCAAGGGATCTGACCTGACGAAGCAGTTTCAA
CAAGAGCTGAAAATATTGAGCAAAATTCGTCATCCACACTTGTTAATCCTTCTTGGCGTG
TGCCCTGATCGTGGTTGCTTAGTGTATGAGTTCATGGAAAATGGTAGCTTAGAGGAGAGG
TTGTTCAGGAAACATGATACACCTCCAATTCCATGGTTTGATAGATATCGAATTGCATGG
GAAGTGGCCTCTGCTCTCGCCTTTCTTCACAACTCCAAGCCAGATCCAATTATTCATCGT
GATCTAAAGCCAGCAAACATATTGCTTGATCGTAATTTTGTCAGTAAAATTGGCGATGTT
GGCCTGTCAACAATGATAAATTCAGACGCTGCATTATCCACCATTTACAGAGATACAGGT
CCTGTGGGAACACTTTGCTACATCGACCCTGAGTACCAAAGGACCGGAATGATCTCTCCA
AAATCTGATGTTTATGCATTTGGGATGGTTCTCTTGCAGTTGTTAACAGCAAAAGCACCA
ATGGGGCTTCCCCACATTGTTGAAACAGCAATCGATAAGGATAGTCTAACTAAGGTACTA
GATTCAAAGGCTGGTGAATGGCCATTAGAAGAAACAAAGAAACTAGCAGCGCTAGCACTT
AAATGCACAGAGATTTGTCGAAGAGACAGGCCTGATTTGAAAGAAGAAATTCTCCCTGCA
TTGGAGAAATTGAAAGAGGTTGCTAATAAGGCTCGAGATTCTGCCTCAACTACCCGGCCT
CCTCCTCCTACCTACTACTTGTGCCCTTTACTCAAGGATGTAATGGAGGAACCTTGTGTG
GCAGCTGATGGGTATACATACGACAGGAAGGCGATAGAAACATGGCTAAAGGATAACGAT
ATATCACCTATGACAAACCTACCGTTACCTCATAAGAACCTTCTACCAAATTATGCACTA
CTTTCTGCAATTCTTGACTGGAAATCAAGAAAGGCTGGAAATATTTAG

Peptide Sequence

PEP ID

XP_016459587.1
PEP Infomation

PREDICTED: U-box domain-containing protein 35-like [Nicotiana tabacum]
Sequence

MEEKDGVVTKVEGLSALNPLNSSTIAVAINGKKKSKYVVSWALDKFVPEGKVCFKLLHVR
PCITGVPTPMGNSIPISQVRDDVVAAFRKDVEWQTSEKLHPYKMLCTRLKVQVEVVQLES
DDIVEAIAHEVSKLNIIKLVIGASSWSIFSRGQSLSSRISDSIPSFCTIYAVSRGKLLSI
RPSNSEINGSSWTEDSNTSCSISTSTGHSSSLLTEKSDLDSSSSYSQFRSPSLPMQRFQA
LSNINQNFPHRRAISNEIIHHKNYSLDFGDSEDDVSSCPQRSFLRERNNLASSFRSLVTD
FYTMADDQASTSGAPTDLSLRNEVDINFELEKLRTELRHTQGMYAVAQTEVLDASRKMNE
LQNRRLEEEIKLQEISLKEEEAKDLVRKEKEEYKAAKREADYVKDCAEREAALRKEAELL
ALREAKEKDKLENALTDQAHQYQEFTWEEIVSSTSSFAENLKIGVGAYGTVYKCSLRHTT
VAVKVLHSKSKGSDLTKQFQQELKILSKIRHPHLLILLGVCPDRGCLVYEFMENGSLEER
LFRKHDTPPIPWFDRYRIAWEVASALAFLHNSKPDPIIHRDLKPANILLDRNFVSKIGDV
GLSTMINSDAALSTIYRDTGPVGTLCYIDPEYQRTGMISPKSDVYAFGMVLLQLLTAKAP
MGLPHIVETAIDKDSLTKVLDSKAGEWPLEETKKLAALALKCTEICRRDRPDLKEEILPA
LEKLKEVANKARDSASTTRPPPPTYYLCPLLKDVMEEPCVAADGYTYDRKAIETWLKDND
ISPMTNLPLPHKNLLPNYALLSAILDWKSRKAGNI

Transcript Sequence

Gene sequence data has not been registered.